Research workbench
AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, kainate glr-3 (Q21415)
Analyse AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, kainate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q21415
- Type
- protein
- Length
- 836 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Glutamate receptor ionotropic, kainate glr-3
- UniProt
- Q21415
- Pockets
- 11 · best druggability 0.67
Structure
1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate receptor ionotropic, kainate glr-3 | protein | 836 | 44% helix, 16% strand | Q21415 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 582 | 0.67 | 0.77 | 56 | empty |
| 2 | 403 | 0.63 | 0.77 | 32 | empty |
| 3 | 73 | 0.59 | 0.89 | 26 | empty |
| 4 | 145 | 0.48 | 0.78 | 20 | empty |
| 5 | 129 | 0.45 | 0.77 | 27 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q21415
- Elsewhere: UniProt Q21415 · AlphaFold DB Q21415
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