Research workbench
AlphaFold monomer V2.0 prediction for glutamate receptor 3.4 (Q8GXJ4)
Analyse AlphaFold monomer V2.0 prediction for glutamate receptor 3.4 (Q8GXJ4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8GXJ4
- Type
- protein
- Length
- 959 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf82721010A87D54712b6c5deC75cb63B8BF88c23
- Molecule
- Glutamate receptor 3.4
- UniProt
- Q8GXJ4
- Pockets
- 11 · best druggability 0.68
Structure
1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate receptor 3.4 | protein | 959 | 42% helix, 16% strand | Q8GXJ4 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 182 | 0.68 | 0.87 | 32 | empty |
| 2 | 64 | 0.54 | 0.87 | 17 | empty |
| 3 | 256 | 0.54 | 0.76 | 28 | empty |
| 4 | 155 | 0.51 | 0.78 | 21 | empty |
| 5 | 181 | 0.42 | 0.73 | 33 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 7LZH · Structure of the glutamate receptor-like channel ATGLR3.4 · an experimental structure of the same protein · chain A against D, TM-score 0.67
- 7LZH · Structure of the glutamate receptor-like channel AtGLR3.4 · an experimental structure of the same protein · chain A against D, TM-score 0.67
- 7LZI · Structure of the glutamate receptor-like channel AtGLR3.4 · an experimental structure of the same protein · chain A against D, TM-score 0.32
- 7LZI · Structure of the glutamate receptor-like channel ATGLR3.4 · an experimental structure of the same protein · chain A against D, TM-score 0.32
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GXJ4
- Elsewhere: UniProt Q8GXJ4 · AlphaFold DB Q8GXJ4
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