Research workbench
AlphaFold monomer V2.0 prediction for glycerol kinase (Q5HGD2)
Analyse AlphaFold monomer V2.0 prediction for glycerol kinase (Q5HGD2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5HGD2
- Type
- protein
- Length
- 498 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x62c0336A3F277EEaC1d87a27937ea94e3FA5e53c
- Molecule
- Glycerol kinase
- UniProt
- Q5HGD2
- Pockets
- 1 · best druggability 0.71
Structure
1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycerol kinase | protein | 498 | 38% helix, 24% strand | Q5HGD2 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 570 | 0.71 | 0.80 | 69 | empty |
Compared structures
- 3G25 · 1.9 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3G25 · 1.9 ångström crystal structure of glycerol kinase (glpk) from staphylococcus aureus in… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3GE1 · 2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in… · an experimental structure of the same protein · chain A against C, TM-score 0.96
- 3GE1 · 2.7 ångström crystal structure of glycerol kinase (glpk) from staphylococcus aureus in… · an experimental structure of the same protein · chain A against C, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HGD2
- Elsewhere: UniProt Q5HGD2 · AlphaFold DB Q5HGD2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.