Research workbench
AlphaFold monomer V2.0 prediction for PDZ domain-containing protein GIPC2 (Q9Z2H7)
Analyse AlphaFold monomer V2.0 prediction for PDZ domain-containing protein GIPC2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z2H7
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- PDZ domain-containing protein GIPC2
- UniProt
- Q9Z2H7
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 27% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ domain-containing protein GIPC2 | protein | 314 | 27% helix, 23% strand | Q9Z2H7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 371 | 0.64 | 0.79 | 53 | empty |
| 2 | 103 | 0.46 | 0.80 | 19 | empty |
| 3 | 54 | 0.29 | 0.75 | 14 | empty |
Compared structures
- 5V6H · Crystal structure of Myosin VI in complex with GH2 domain of GIPC2 · an experimental structure of the same protein · chain A against E, TM-score 0.24
- 5V6H · Crystal structure of myosin VI in complex with GH2 domain of GIPC2 · an experimental structure of the same protein · chain A against E, TM-score 0.24
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z2H7
- Elsewhere: UniProt Q9Z2H7 · AlphaFold DB Q9Z2H7
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