Research workbench
AlphaFold monomer V2.0 prediction for PDZ domain-containing protein GIPC2 (Q8TF65)
Analyse AlphaFold monomer V2.0 prediction for PDZ domain-containing protein GIPC2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8TF65
- Type
- protein
- Length
- 315 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe43D264c0E4229A2c42bC24F7Fed41a1fCf1938d
- Molecule
- PDZ domain-containing protein GIPC2
- UniProt
- Q8TF65
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 29% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PDZ domain-containing protein GIPC2 | protein | 315 | 29% helix, 23% strand | Q8TF65 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 623 | 0.70 | 0.78 | 64 | empty |
| 2 | 185 | 0.51 | 0.77 | 31 | empty |
Compared structures
- 3GGE · Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2 · an experimental structure of the same protein · chain A against C, TM-score 0.29
- 3GGE · Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2 · an experimental structure of the same protein · chain A against C, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TF65
- Elsewhere: UniProt Q8TF65 · AlphaFold DB Q8TF65
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