Research workbench
AlphaFold monomer V2.0 prediction for glucosamine inositolphosphorylceramide transferase 1 (Q53WK1)
Analyse AlphaFold monomer V2.0 prediction for glucosamine inositolphosphorylceramide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q53WK1
- Type
- protein
- Length
- 744 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Glucosamine inositolphosphorylceramide transferase 1
- UniProt
- Q53WK1
- Pockets
- 11 · best druggability 0.74
Structure
1 distinct chain · 31% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucosamine inositolphosphorylceramide transferase 1 | protein | 744 | 31% helix, 28% strand | Q53WK1 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 403 | 0.74 | 0.84 | 39 | empty |
| 2 | 349 | 0.69 | 0.82 | 42 | empty |
| 3 | 287 | 0.68 | 0.83 | 31 | empty |
| 4 | 184 | 0.48 | 0.76 | 19 | empty |
| 5 | 143 | 0.48 | 0.78 | 21 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q53WK1
- Elsewhere: UniProt Q53WK1 · AlphaFold DB Q53WK1
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