Research workbench
AlphaFold monomer V2.0 prediction for golgi to er traffic protein 2 (P40056)
Analyse AlphaFold monomer V2.0 prediction for golgi to er traffic protein 2 (P40056) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P40056
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Golgi to er traffic protein 2
- UniProt
- P40056
- Pockets
- 3 · best druggability 0.60
Structure
1 distinct chain · 57% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi to er traffic protein 2 | protein | 285 | 57% helix, 0% strand | P40056 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 289 | 0.60 | 0.78 | 29 | empty |
| 2 | 231 | 0.57 | 0.78 | 25 | empty |
| 3 | 56 | 0.37 | 0.79 | 13 | empty |
Compared structures
- 3ZS9 · S. cerevisiae GET3-ADP-ALF4- complex with a cytosolic GET2 fragment · an experimental structure of the same protein · chain A against D, TM-score 0.11
- 3ZS9 · S. cerevisiae Get3-ADP-AlF4- complex with a cytosolic Get2 fragment · an experimental structure of the same protein · chain A against D, TM-score 0.11
- 3SJD · Crystal structure of S. cerevisiae GET3 with bound ADP-MG2+ in complex with GET2… · an experimental structure of the same protein · chain A against D, TM-score 0.10
- 3SJD · Crystal structure of S. cerevisiae Get3 with bound ADP-Mg2+ in complex with Get2… · an experimental structure of the same protein · chain A against D, TM-score 0.10
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P40056
- Elsewhere: UniProt P40056 · AlphaFold DB P40056
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