Research workbench
AlphaFold monomer V2.0 prediction for golgi to er traffic protein 2 (C5DBT1)
Analyse AlphaFold monomer V2.0 prediction for golgi to er traffic protein 2 (C5DBT1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5DBT1
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEf23550c763554310A2aB457254725BFb493012e
- Molecule
- Golgi to er traffic protein 2
- UniProt
- C5DBT1
- Pockets
- 3 · best druggability 0.57
Structure
1 distinct chain · 60% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi to er traffic protein 2 | protein | 306 | 60% helix, 0% strand | C5DBT1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 217 | 0.57 | 0.79 | 22 | empty |
| 2 | 56 | 0.36 | 0.78 | 15 | empty |
| 3 | 72 | 0.34 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5DBT1
- Elsewhere: UniProt C5DBT1 · AlphaFold DB C5DBT1
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