Research workbench
AlphaFold monomer V2.0 prediction for aminomethyltransferase (Q9WY54)
Analyse AlphaFold monomer V2.0 prediction for aminomethyltransferase (Q9WY54) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9WY54
- Type
- protein
- Length
- 364 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Aminomethyltransferase
- UniProt
- Q9WY54
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 25% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aminomethyltransferase | protein | 364 | 25% helix, 35% strand | Q9WY54 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 541 | 0.73 | 0.81 | 65 | empty |
| 2 | 143 | 0.44 | 0.76 | 16 | empty |
Compared structures
- 1WOR · Crystal Structure of T-protein of the Glycine Cleavage System · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOR · Crystal structure of T-protein of the glycine cleavage system · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOO · Crystal structure of T-protein of the Glycine Cleavage System · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOO · Crystal structure of T-protein of the glycine cleavage system · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOP · Crystal structure of T-protein of the glycine cleavage system · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOP · Crystal Structure of T-protein of the Glycine Cleavage System · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOS · Crystal structure of T-protein of the glycine cleavage system · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WOS · Crystal Structure of T-protein of the Glycine Cleavage System · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WY54
- Elsewhere: UniProt Q9WY54 · AlphaFold DB Q9WY54
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