Research workbench
AlphaFold monomer V2.0 prediction for glutamyl-TRNA(GLN) amidotransferase subunit a, mitochondrial (Q03557)
Analyse AlphaFold monomer V2.0 prediction for glutamyl-TRNA(GLN) amidotransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q03557
- Type
- protein
- Length
- 464 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x854ac6A396D6e8Ea3EFbfaDbB10Bb9DBe804468b
- Molecule
- Glutamyl-TRNA(GLN) amidotransferase subunit a, mitochondrial
- UniProt
- Q03557
- Pockets
- 6 · best druggability 0.48
Structure
1 distinct chain · 39% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamyl-TRNA(GLN) amidotransferase subunit a, mitochondrial | protein | 464 | 39% helix, 16% strand | Q03557 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 190 | 0.48 | 0.75 | 28 | empty |
| 2 | 97 | 0.40 | 0.76 | 20 | empty |
| 3 | 108 | 0.39 | 0.75 | 17 | empty |
| 4 | 122 | 0.38 | 0.73 | 20 | empty |
| 5 | 61 | 0.36 | 0.78 | 12 | empty |
Compared structures
- 4N0I · Crystal structure of S. cerevisiae mitochondrial gatfab in complex with glutamine · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 4N0I · Crystal structure of S. cerevisiae mitochondrial GatFAB in complex with glutamine · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 4N0H · Crystal structure of S. cerevisiae mitochondrial GatFAB · an experimental structure of the same protein · chain A against A, TM-score 0.95
- 4N0H · Crystal structure of S. cerevisiae mitochondrial gatfab · an experimental structure of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03557
- Elsewhere: UniProt Q03557 · AlphaFold DB Q03557
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