Research workbench
AlphaFold monomer V2.0 prediction for alpha-protein kinase 1 (Q96QP1)
Analyse AlphaFold monomer V2.0 prediction for alpha-protein kinase 1 (Q96QP1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q96QP1
- Type
- protein
- Length
- 1,244 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Alpha-protein kinase 1
- UniProt
- Q96QP1
- Pockets
- 13 · best druggability 0.87
Structure
1 distinct chain · 34% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-protein kinase 1 | protein | 1244 | 34% helix, 7% strand | Q96QP1 |
Pockets
13 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 799 | 0.87 | 0.90 | 120 | empty |
| 2 | 248 | 0.73 | 0.87 | 36 | empty |
| 3 | 946 | 0.73 | 0.77 | 73 | empty |
| 4 | 143 | 0.62 | 0.86 | 32 | empty |
| 5 | 146 | 0.60 | 0.84 | 23 | empty |
Compared structures
- 5Z2C · Crystal structure of alpk-1 N-terminal domain in complex with ADP- heptose · an experimental structure of the same protein · chain A against B, TM-score 0.36
- 5Z2C · Crystal structure of ALPK-1 N-terminal domain in complex with ADP-heptose · an experimental structure of the same protein · chain A against B, TM-score 0.36
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96QP1
- Elsewhere: UniProt Q96QP1 · AlphaFold DB Q96QP1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.