Research workbench
AlphaFold monomer V2.0 prediction for germacrene a hydroxylase (D5JBW9)
Analyse AlphaFold monomer V2.0 prediction for germacrene a hydroxylase (D5JBW9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D5JBW9
- Type
- protein
- Length
- 488 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Germacrene a hydroxylase
- UniProt
- D5JBW9
- Pockets
- 7 · best druggability 0.85
Structure
1 distinct chain · 53% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Germacrene a hydroxylase | protein | 488 | 53% helix, 9% strand | D5JBW9 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 569 | 0.85 | 0.90 | 84 | empty |
| 2 | 71 | 0.51 | 0.85 | 18 | empty |
| 3 | 141 | 0.46 | 0.77 | 21 | empty |
| 4 | 64 | 0.36 | 0.78 | 15 | empty |
| 5 | 57 | 0.28 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5JBW9
- Elsewhere: UniProt D5JBW9 · AlphaFold DB D5JBW9
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