Research workbench
AlphaFold monomer V2.0 prediction for exodeoxyribonuclease 10 (P0AEK0)
Analyse AlphaFold monomer V2.0 prediction for exodeoxyribonuclease 10 (P0AEK0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AEK0
- Type
- protein
- Length
- 220 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Exodeoxyribonuclease 10
- UniProt
- P0AEK0
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 43% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exodeoxyribonuclease 10 | protein | 220 | 43% helix, 17% strand | P0AEK0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 227 | 0.54 | 0.77 | 23 | empty |
| 2 | 108 | 0.34 | 0.73 | 21 | empty |
| 3 | 59 | 0.29 | 0.74 | 9 | empty |
Compared structures
- 4FZY · Exonuclease X in complex with 12bp blunt-ended dsDNA · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 4FZY · Exonuclease X in complex with 12BP blunt-ended dsdna · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 4FZX · Exonuclease X in complex with 3' overhanging duplex DNA · an experimental structure of the same protein · chain A against C, TM-score 0.75
- 4FZX · Exonuclease X in complex with 3' overhanging duplex DNA · an experimental structure of the same protein · chain A against C, TM-score 0.75
- 4FZZ · Exonuclease X in complex with 5' overhanging duplex DNA · an experimental structure of the same protein · chain A against A, TM-score 0.75
- 4FZZ · Exonuclease X in complex with 5' overhanging duplex DNA · an experimental structure of the same protein · chain A against A, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEK0
- Elsewhere: UniProt P0AEK0 · AlphaFold DB P0AEK0
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