Research workbench
AlphaFold monomer V2.0 prediction for ependymin-1 (P28770)
Analyse AlphaFold monomer V2.0 prediction for ependymin-1 (P28770) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P28770
- Type
- protein
- Length
- 221 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Ependymin-1
- UniProt
- P28770
- Pockets
- 2 · best druggability 0.41
Structure
1 distinct chain · 11% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ependymin-1 | protein | 221 | 11% helix, 41% strand | P28770 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.41 | 0.80 | 19 | empty |
| 2 | 66 | 0.30 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28770
- Elsewhere: UniProt P28770 · AlphaFold DB P28770
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