Research workbench
AlphaFold monomer V2.0 prediction for cytosolic endo-beta-N- acetylglucosaminidase (Q8NFI3)
Analyse AlphaFold monomer V2.0 prediction for cytosolic endo-beta-N… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NFI3
- Type
- protein
- Length
- 743 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfA417B18af2a1c4a3E1bB0F48Eb0f4f629972ce1
- Molecule
- Cytosolic endo-beta-N-acetylglucosaminidase
- UniProt
- Q8NFI3
- Pockets
- 11 · best druggability 0.74
Structure
1 distinct chain · 21% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytosolic endo-beta-N-acetylglucosaminidase | protein | 743 | 21% helix, 31% strand | Q8NFI3 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.74 | 0.97 | 30 | empty |
| 2 | 162 | 0.62 | 0.84 | 24 | empty |
| 3 | 410 | 0.61 | 0.76 | 55 | empty |
| 4 | 225 | 0.56 | 0.78 | 26 | empty |
| 5 | 72 | 0.51 | 0.85 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NFI3
- Elsewhere: UniProt Q8NFI3 · AlphaFold DB Q8NFI3
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