Research workbench
AlphaFold monomer V2.0 prediction for beta-agarase (P13734)
Analyse AlphaFold monomer V2.0 prediction for beta-agarase (P13734) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P13734
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Beta-agarase
- UniProt
- P13734
- Pockets
- 3 · best druggability 0.79
Structure
1 distinct chain · 34% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-agarase | protein | 505 | 34% helix, 24% strand | P13734 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 520 | 0.79 | 0.86 | 57 | empty |
| 2 | 549 | 0.65 | 0.76 | 57 | empty |
| 3 | 58 | 0.30 | 0.75 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13734
- Elsewhere: UniProt P13734 · AlphaFold DB P13734
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