Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (Q12L26)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12L26
- Type
- protein
- Length
- 622 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- 1-deoxy-D-xylulose-5-phosphate synthase
- UniProt
- Q12L26
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 45% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose-5-phosphate synthase | protein | 622 | 45% helix, 17% strand | Q12L26 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 661 | 0.76 | 0.82 | 71 | empty |
| 2 | 169 | 0.44 | 0.74 | 24 | empty |
| 3 | 123 | 0.44 | 0.77 | 18 | empty |
| 4 | 78 | 0.30 | 0.73 | 16 | empty |
| 5 | 53 | 0.27 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12L26
- Elsewhere: UniProt Q12L26 · AlphaFold DB Q12L26
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