Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (A6VUE5)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6VUE5
- Type
- protein
- Length
- 625 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1B6204b594D54D3E83B7C102EA0B596aAf1188e4
- Molecule
- 1-deoxy-D-xylulose-5-phosphate synthase
- UniProt
- A6VUE5
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 43% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose-5-phosphate synthase | protein | 625 | 43% helix, 16% strand | A6VUE5 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 514 | 0.76 | 0.84 | 61 | empty |
| 2 | 124 | 0.40 | 0.75 | 24 | empty |
| 3 | 53 | 0.30 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6VUE5
- Elsewhere: UniProt A6VUE5 · AlphaFold DB A6VUE5
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