Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (B8F3A4)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8F3A4
- Type
- protein
- Length
- 615 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xae000B6ACc50A949c2ebA0D01Ee7058040FaAca9
- Molecule
- 1-deoxy-D-xylulose-5-phosphate synthase
- UniProt
- B8F3A4
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose-5-phosphate synthase | protein | 615 | 44% helix, 16% strand | B8F3A4 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 609 | 0.76 | 0.82 | 62 | empty |
| 2 | 84 | 0.35 | 0.75 | 15 | empty |
| 3 | 81 | 0.32 | 0.73 | 15 | empty |
| 4 | 83 | 0.31 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8F3A4
- Elsewhere: UniProt B8F3A4 · AlphaFold DB B8F3A4
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