Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase (A3P7W4)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose-5-phosphate synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3P7W4
- Type
- protein
- Length
- 634 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf7Ea384D3b95C3A242403Fdf8e5bA55488D27a6b
- Molecule
- 1-deoxy-D-xylulose-5-phosphate synthase
- UniProt
- A3P7W4
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 42% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose-5-phosphate synthase | protein | 634 | 42% helix, 15% strand | A3P7W4 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 464 | 0.78 | 0.86 | 55 | empty |
| 2 | 133 | 0.43 | 0.76 | 21 | empty |
| 3 | 101 | 0.39 | 0.76 | 23 | empty |
| 4 | 59 | 0.27 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3P7W4
- Elsewhere: UniProt A3P7W4 · AlphaFold DB A3P7W4
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