Research workbench
AlphaFold monomer V2.0 prediction for probable 1-deoxy-D- xylulose-5-phosphate synthase 2, chloroplastic (Q6YU51)
Analyse AlphaFold monomer V2.0 prediction for probable 1-deoxy-D- xylulose-5-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6YU51
- Type
- protein
- Length
- 713 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1D92e711bBA89dBAC75BAECfA680364861101820
- Molecule
- Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
- UniProt
- Q6YU51
- Pockets
- 7 · best druggability 0.79
Structure
1 distinct chain · 41% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic | protein | 713 | 41% helix, 15% strand | Q6YU51 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 987 | 0.79 | 0.81 | 99 | empty |
| 2 | 667 | 0.69 | 0.77 | 41 | empty |
| 3 | 53 | 0.48 | 0.86 | 17 | empty |
| 4 | 148 | 0.46 | 0.76 | 25 | empty |
| 5 | 116 | 0.40 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6YU51
- Elsewhere: UniProt Q6YU51 · AlphaFold DB Q6YU51
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