Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Q3MDL2)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose 5-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3MDL2
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase
- UniProt
- Q3MDL2
- Pockets
- 4 · best druggability 0.69
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | protein | 398 | 49% helix, 15% strand | Q3MDL2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 298 | 0.69 | 0.84 | 53 | empty |
| 2 | 154 | 0.48 | 0.77 | 27 | empty |
| 3 | 142 | 0.47 | 0.78 | 25 | empty |
| 4 | 71 | 0.32 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3MDL2
- Elsewhere: UniProt Q3MDL2 · AlphaFold DB Q3MDL2
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