Research workbench
AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose 5-phosphate reductoisomerase (C5D9C1)
Analyse AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose 5-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5D9C1
- Type
- protein
- Length
- 381 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x731d8ea2236F13759e0bE3C1C2bA23586AF10363
- Molecule
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase
- UniProt
- C5D9C1
- Pockets
- 4 · best druggability 0.73
Structure
1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | protein | 381 | 50% helix, 15% strand | C5D9C1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 328 | 0.73 | 0.85 | 50 | empty |
| 2 | 87 | 0.42 | 0.79 | 27 | empty |
| 3 | 79 | 0.39 | 0.78 | 14 | empty |
| 4 | 103 | 0.35 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5D9C1
- Elsewhere: UniProt C5D9C1 · AlphaFold DB C5D9C1
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