Research workbench
AlphaFold monomer V2.0 prediction for spliceosome RNA helicase DDX39B (P60024)
Analyse AlphaFold monomer V2.0 prediction for spliceosome RNA helicase DDX39B (P60024) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P60024
- Type
- protein
- Length
- 428 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- Spliceosome RNA helicase DDX39B
- UniProt
- P60024
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 39% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spliceosome RNA helicase DDX39B | protein | 428 | 39% helix, 15% strand | P60024 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.74 | 0.96 | 28 | empty |
| 2 | 124 | 0.41 | 0.76 | 23 | empty |
| 3 | 91 | 0.39 | 0.76 | 13 | empty |
| 4 | 91 | 0.36 | 0.75 | 22 | empty |
| 5 | 82 | 0.35 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P60024
- Elsewhere: UniProt P60024 · AlphaFold DB P60024
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