Research workbench
AlphaFold monomer V2.0 prediction for dipeptide and tripeptide permease B (Q8ZLD6)
Analyse AlphaFold monomer V2.0 prediction for dipeptide and tripeptide permease B… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8ZLD6
- Type
- protein
- Length
- 489 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x477e82e7740Cc981CeD1810961182B93E473F173
- Molecule
- Dipeptide and tripeptide permease B
- UniProt
- Q8ZLD6
- Pockets
- 7 · best druggability 0.77
Structure
1 distinct chain · 80% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dipeptide and tripeptide permease B | protein | 489 | 80% helix, 1% strand | Q8ZLD6 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 820 | 0.77 | 0.81 | 67 | empty |
| 2 | 147 | 0.54 | 0.80 | 27 | empty |
| 3 | 146 | 0.45 | 0.76 | 25 | empty |
| 4 | 59 | 0.41 | 0.81 | 14 | empty |
| 5 | 73 | 0.36 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZLD6
- Elsewhere: UniProt Q8ZLD6 · AlphaFold DB Q8ZLD6
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