Research workbench
AlphaFold monomer V2.0 prediction for down syndrome cell adhesion molecule-like protein DSCAM2 (Q9VS29)
Analyse AlphaFold monomer V2.0 prediction for down syndrome cell adhesion molecule-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VS29
- Type
- protein
- Length
- 2,074 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6b4F207dA8164c2AB750b88E3119440cD4E16974
- Molecule
- Down syndrome cell adhesion molecule-like protein DSCAM2
- UniProt
- Q9VS29
- Pockets
- 16 · best druggability 0.73
Structure
1 distinct chain · 5% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Down syndrome cell adhesion molecule-like protein DSCAM2 | protein | 2074 | 5% helix, 40% strand | Q9VS29 |
Pockets
16 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1012 | 0.73 | 0.76 | 80 | empty |
| 2 | 552 | 0.63 | 0.75 | 44 | empty |
| 3 | 152 | 0.48 | 0.77 | 23 | empty |
| 4 | 132 | 0.43 | 0.76 | 19 | empty |
| 5 | 70 | 0.37 | 0.78 | 14 | empty |
Modifications
Observed in the structure: 13 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VS29
- Elsewhere: UniProt Q9VS29 · AlphaFold DB Q9VS29
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