Research workbench
AlphaFold monomer V2.0 prediction for THIOL:DISULFIDE interchange protein dsbd (Q87KW0)
Analyse AlphaFold monomer V2.0 prediction for THIOL:DISULFIDE interchange protein dsbd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q87KW0
- Type
- protein
- Length
- 613 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- THIOL:DISULFIDE interchange protein dsbd
- UniProt
- Q87KW0
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 48% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | THIOL:DISULFIDE interchange protein dsbd | protein | 613 | 48% helix, 14% strand | Q87KW0 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1040 | 0.74 | 0.76 | 77 | empty |
| 2 | 707 | 0.68 | 0.76 | 73 | empty |
| 3 | 169 | 0.48 | 0.76 | 29 | empty |
| 4 | 95 | 0.34 | 0.74 | 17 | empty |
| 5 | 73 | 0.31 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87KW0
- Elsewhere: UniProt Q87KW0 · AlphaFold DB Q87KW0
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