Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (P0DA74)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (P0DA74) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DA74
- Type
- protein
- Length
- 1,036 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x52E3CDE9815A62B85857BFe668884c9Bb2099566
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- P0DA74
- Pockets
- 11 · best druggability 0.56
Structure
1 distinct chain · 45% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1036 | 45% helix, 17% strand | P0DA74 |
Pockets
11 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 282 | 0.56 | 0.76 | 33 | empty |
| 2 | 181 | 0.48 | 0.76 | 27 | empty |
| 3 | 107 | 0.41 | 0.76 | 20 | empty |
| 4 | 121 | 0.38 | 0.74 | 21 | empty |
| 5 | 54 | 0.38 | 0.80 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DA74
- Elsewhere: UniProt P0DA74 · AlphaFold DB P0DA74
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