Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q5HNK2)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q5HNK2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5HNK2
- Type
- protein
- Length
- 1,065 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- Q5HNK2
- Pockets
- 12 · best druggability 0.52
Structure
1 distinct chain · 46% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1065 | 46% helix, 16% strand | Q5HNK2 |
Pockets
12 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 249 | 0.52 | 0.76 | 24 | empty |
| 2 | 225 | 0.50 | 0.75 | 28 | empty |
| 3 | 122 | 0.43 | 0.76 | 19 | empty |
| 4 | 119 | 0.41 | 0.76 | 21 | empty |
| 5 | 181 | 0.41 | 0.72 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HNK2
- Elsewhere: UniProt Q5HNK2 · AlphaFold DB Q5HNK2
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