Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9CPK3)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9CPK3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CPK3
- Type
- protein
- Length
- 1,159 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7Fc2FCdc43da62802992E6eD563AB4572b55CAe4
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- Q9CPK3
- Pockets
- 17 · best druggability 0.64
Structure
1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1159 | 50% helix, 15% strand | Q9CPK3 |
Pockets
17 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 378 | 0.64 | 0.78 | 39 | empty |
| 2 | 449 | 0.63 | 0.77 | 38 | empty |
| 3 | 290 | 0.59 | 0.78 | 38 | empty |
| 4 | 206 | 0.54 | 0.79 | 24 | empty |
| 5 | 128 | 0.49 | 0.79 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CPK3
- Elsewhere: UniProt Q9CPK3 · AlphaFold DB Q9CPK3
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