Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9JXZ2)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9JXZ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9JXZ2
- Type
- protein
- Length
- 1,144 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBCB99685929aa6d5A6201026C8CEC007c0951315
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- Q9JXZ2
- Pockets
- 8 · best druggability 0.64
Structure
1 distinct chain · 48% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1144 | 48% helix, 15% strand | Q9JXZ2 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 427 | 0.64 | 0.77 | 57 | empty |
| 2 | 382 | 0.63 | 0.78 | 35 | empty |
| 3 | 233 | 0.52 | 0.76 | 31 | empty |
| 4 | 144 | 0.45 | 0.76 | 25 | empty |
| 5 | 111 | 0.43 | 0.77 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JXZ2
- Elsewhere: UniProt Q9JXZ2 · AlphaFold DB Q9JXZ2
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