Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (O84549)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (O84549) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O84549
- Type
- protein
- Length
- 1,237 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x88a254fe793D05F0a0382BeD80631d76E545AeE9
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- O84549
- Pockets
- 19 · best druggability 0.72
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1237 | 49% helix, 14% strand | O84549 |
Pockets
19 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 755 | 0.72 | 0.78 | 57 | empty |
| 2 | 469 | 0.70 | 0.80 | 47 | empty |
| 3 | 682 | 0.69 | 0.76 | 52 | empty |
| 4 | 81 | 0.50 | 0.84 | 14 | empty |
| 5 | 137 | 0.48 | 0.78 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O84549
- Elsewhere: UniProt O84549 · AlphaFold DB O84549
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