Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9Z7N8)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase III subunit alpha (Q9Z7N8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z7N8
- Type
- protein
- Length
- 1,240 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA98E98d7D7aC99F2d3D548BF567847cac90aca12
- Molecule
- DNA polymerase III subunit alpha
- UniProt
- Q9Z7N8
- Pockets
- 20 · best druggability 0.70
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase III subunit alpha | protein | 1240 | 49% helix, 14% strand | Q9Z7N8 |
Pockets
20 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 638 | 0.70 | 0.78 | 47 | empty |
| 2 | 610 | 0.66 | 0.76 | 52 | empty |
| 3 | 168 | 0.56 | 0.81 | 25 | empty |
| 4 | 187 | 0.56 | 0.80 | 27 | empty |
| 5 | 115 | 0.50 | 0.81 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z7N8
- Elsewhere: UniProt Q9Z7N8 · AlphaFold DB Q9Z7N8
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