Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase (P05468)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase (P05468) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P05468
- Type
- protein
- Length
- 994 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- DNA polymerase
- UniProt
- P05468
- Pockets
- 13 · best druggability 0.77
Structure
1 distinct chain · 29% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase | protein | 994 | 29% helix, 33% strand | P05468 |
Pockets
13 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1185 | 0.77 | 0.79 | 119 | empty |
| 2 | 654 | 0.66 | 0.75 | 48 | empty |
| 3 | 233 | 0.61 | 0.81 | 32 | empty |
| 4 | 150 | 0.43 | 0.75 | 29 | empty |
| 5 | 93 | 0.42 | 0.78 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05468
- Elsewhere: UniProt P05468 · AlphaFold DB P05468
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