Research workbench
AlphaFold monomer V2.0 prediction for DNA polymerase II small subunit (Q9HMR7)
Analyse AlphaFold monomer V2.0 prediction for DNA polymerase II small subunit (Q9HMR7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HMR7
- Type
- protein
- Length
- 508 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- DNA polymerase II small subunit
- UniProt
- Q9HMR7
- Pockets
- 5 · best druggability 0.72
Structure
1 distinct chain · 28% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase II small subunit | protein | 508 | 28% helix, 24% strand | Q9HMR7 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 658 | 0.72 | 0.79 | 66 | empty |
| 2 | 105 | 0.50 | 0.81 | 20 | empty |
| 3 | 96 | 0.39 | 0.76 | 13 | empty |
| 4 | 75 | 0.33 | 0.75 | 17 | empty |
| 5 | 50 | 0.32 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HMR7
- Elsewhere: UniProt Q9HMR7 · AlphaFold DB Q9HMR7
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