Research workbench
AlphaFold monomer V2.0 prediction for DNA ligase (B3PTU7)
Analyse AlphaFold monomer V2.0 prediction for DNA ligase (B3PTU7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3PTU7
- Type
- protein
- Length
- 718 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- DNA ligase
- UniProt
- B3PTU7
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 37% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 718 | 37% helix, 21% strand | B3PTU7 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 530 | 0.74 | 0.82 | 47 | empty |
| 2 | 664 | 0.67 | 0.76 | 58 | empty |
| 3 | 57 | 0.61 | 0.92 | 17 | empty |
| 4 | 373 | 0.58 | 0.76 | 35 | empty |
| 5 | 141 | 0.47 | 0.78 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3PTU7
- Elsewhere: UniProt B3PTU7 · AlphaFold DB B3PTU7
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