Research workbench
AlphaFold monomer V2.0 prediction for DNA ligase (Q1WSH6)
Analyse AlphaFold monomer V2.0 prediction for DNA ligase (Q1WSH6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1WSH6
- Type
- protein
- Length
- 672 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- DNA ligase
- UniProt
- Q1WSH6
- Pockets
- 9 · best druggability 0.75
Structure
1 distinct chain · 40% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 672 | 40% helix, 21% strand | Q1WSH6 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 393 | 0.75 | 0.85 | 45 | empty |
| 2 | 520 | 0.65 | 0.77 | 37 | empty |
| 3 | 197 | 0.49 | 0.76 | 26 | empty |
| 4 | 82 | 0.44 | 0.80 | 21 | empty |
| 5 | 211 | 0.44 | 0.73 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1WSH6
- Elsewhere: UniProt Q1WSH6 · AlphaFold DB Q1WSH6
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