Research workbench
AlphaFold monomer V2.0 prediction for DNA ligase (Q72MA6)
Analyse AlphaFold monomer V2.0 prediction for DNA ligase (Q72MA6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q72MA6
- Type
- protein
- Length
- 681 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- DNA ligase
- UniProt
- Q72MA6
- Pockets
- 8 · best druggability 0.73
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 681 | 39% helix, 21% strand | Q72MA6 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 543 | 0.73 | 0.81 | 62 | empty |
| 2 | 532 | 0.72 | 0.80 | 50 | empty |
| 3 | 347 | 0.68 | 0.82 | 31 | empty |
| 4 | 85 | 0.55 | 0.86 | 22 | empty |
| 5 | 165 | 0.54 | 0.79 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72MA6
- Elsewhere: UniProt Q72MA6 · AlphaFold DB Q72MA6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.