Research workbench
AlphaFold monomer V2.0 prediction for DNA ligase (Q6AEE5)
Analyse AlphaFold monomer V2.0 prediction for DNA ligase (Q6AEE5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6AEE5
- Type
- protein
- Length
- 747 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- DNA ligase
- UniProt
- Q6AEE5
- Pockets
- 7 · best druggability 0.83
Structure
1 distinct chain · 36% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 747 | 36% helix, 21% strand | Q6AEE5 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 647 | 0.83 | 0.88 | 81 | empty |
| 2 | 692 | 0.73 | 0.79 | 56 | empty |
| 3 | 249 | 0.55 | 0.77 | 28 | empty |
| 4 | 190 | 0.46 | 0.75 | 34 | empty |
| 5 | 154 | 0.44 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6AEE5
- Elsewhere: UniProt Q6AEE5 · AlphaFold DB Q6AEE5
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