Research workbench
AlphaFold monomer V2.0 prediction for DNA ligase (Q2KUU5)
Analyse AlphaFold monomer V2.0 prediction for DNA ligase (Q2KUU5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2KUU5
- Type
- protein
- Length
- 695 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- DNA ligase
- UniProt
- Q2KUU5
- Pockets
- 6 · best druggability 0.80
Structure
1 distinct chain · 38% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA ligase | protein | 695 | 38% helix, 23% strand | Q2KUU5 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 849 | 0.80 | 0.82 | 79 | empty |
| 2 | 349 | 0.64 | 0.79 | 34 | empty |
| 3 | 99 | 0.48 | 0.81 | 21 | empty |
| 4 | 148 | 0.46 | 0.77 | 19 | empty |
| 5 | 127 | 0.45 | 0.77 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KUU5
- Elsewhere: UniProt Q2KUU5 · AlphaFold DB Q2KUU5
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