UniProt Q9X6J6
Transcription attenuation protein MtrB (Q9X6J6)
Transcription attenuation protein MtrB (UniProt Q9X6J6): 51 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 279 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q9X6J6
- Protein
- Transcription attenuation protein MtrB
- Experimental structures
- 51
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 279 · 16 records with a druggable one
Structures
52 records of Q9X6J6 in the MolNFT archive: 51 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1C9S | Crystal structure of a complex of TRP RNA-binding attenuation protein with a 53-base single… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.86) |
| 1C9S | Crystal structure of a complex of TRP RNA-binding attenuation protein with a 53-base single… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 1GTF | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 53-nucleotide RNA… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.79) |
| 1GTF | The structure of the TRP RNA-binding attenuation protein (trap) bound to a 53-nucleotide RNA… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 1GTN | Structure of the trp RNA-binding attenuation protein (TRAP) bound to an RNA molecule containing 11… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.78) |
| 1GTN | Structure of the TRP RNA-binding attenuation protein (trap) bound to an RNA molecule containing 11… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 1QAW | Regulatory Features of the TRP Operon and the Crystal Structure of the TRP RNA-Binding Attenuation… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K | TRP | 11 (best 0.77) |
| 1QAW | Regulatory features of the TRP operon and the crystal structure of the TRP RNA-binding attenuation… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K | — | — |
| 1UTD | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.85) |
| 1UTD | The structure of the TRP RNA-binding attenuation protein (trap) bound to a 63-nucleotide RNA… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 2EXS | TRAP3 (engineered TRAP) | x-ray diffraction | A, B, C | TRP | 4 (best 0.75) |
| 2EXS | TRAP3 (engineered trap) | x-ray diffraction | A, B, C | — | — |
| 2EXT | TRAP4 (engineered TRAP) | x-ray diffraction | A, B, C | TRP | 4 (best 0.75) |
| 2EXT | TRAP4 (engineered trap) | x-ray diffraction | A, B, C | — | — |
| 2ZCZ | Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | x-ray diffraction | A, B, C, D, E, F | — | — |
| 2ZCZ | Crystal structures and thermostability of mutant TRAP3 A7 (engineered trap) | x-ray diffraction | A, B, C, D, E, F | — | — |
| 2ZD0 | Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | x-ray diffraction | A, B, C | — | — |
| 2ZD0 | Crystal structures and thermostability of mutant TRAP3 A5 (engineered trap) | x-ray diffraction | A, B, C | — | — |
| 2ZP8 | The Nature of the TRAP:Anti-TRAP complex | x-ray diffraction | A, B, C, D | — | — |
| 2ZP8 | The nature of the TRAP:ANTI-trap complex | x-ray diffraction | A, B, C, D | — | — |
| 2ZP9 | The Nature of the TRAP:Anti-TRAP complex | x-ray diffraction | A, B, F, G, K, L | — | — |
| 2ZP9 | The nature of the TRAP:ANTI-trap complex | x-ray diffraction | A, B, F, G, K, L | — | — |
| 3AQD | Unliganded TRAP | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 3AQD | Unliganded trap | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 3ZZS | Engineered 12-subunit Bacillus stearothermophilus trp RNA-binding attenuation protein (TRAP) | x-ray diffraction | A, B, C, D, E, F, G, H, I | — | — |
| 3ZZS | Engineered 12-subunit bacillus stearothermophilus TRP RNA-binding attenuation protein (trap) | x-ray diffraction | A, B, C, D, E, F, G, H, I | — | — |
| 4V4F | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a RNA molecule containing… | x-ray diffraction | AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO, BP, BQ, BR, BS, BT, BU, BV | — | — |
| 5EEU | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 1.31 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEU | Radiation damage to the trap-RNA complex: dose (dwd) 1.31 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEV | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 3.88 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEV | Radiation damage to the trap-RNA complex: dose (dwd) 3.88 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEW | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 6.45 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEW | Radiation damage to the trap-RNA complex: dose (dwd) 6.45 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEX | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 9.02 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEX | Radiation damage to the trap-RNA complex: dose (dwd) 9.02 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEY | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 11.6 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.81) |
| 5EEY | Radiation damage to the trap-RNA complex: dose (dwd) 11.6 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EEZ | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 14.2 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.82) |
| 5EEZ | Radiation damage to the trap-RNA complex: dose (dwd) 14.2 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EF0 | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 16.7 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EF0 | Radiation damage to the trap-RNA complex: dose (dwd) 16.7 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EF1 | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 19.3 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.82) |
| 5EF1 | Radiation damage to the trap-RNA complex: dose (dwd) 19.3 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EF2 | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 21.9 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.82) |
| 5EF2 | Radiation damage to the trap-RNA complex: dose (dwd) 21.9 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 5EF3 | RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 25.0 MGy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | TRP | 20 (best 0.82) |
| 5EF3 | Radiation damage to the trap-RNA complex: dose (dwd) 25.0 mgy | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V | — | — |
| 6RVV | Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together… | electron microscopy | AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, HA, HB, HC, HD, HE, HF, HG, HH, HI, HJ, HK, IA, IB, IC, ID, IE, IF, IG, IH, II, IJ, IK, JA, JB, JC, JD, JE, JF, JG, JH, JI, JJ, JK, KA, KB, KC, KD, KE, KF, KG, KH, KI, KJ, KK, LA, LB, LC, LD, LE, LF, LG, LH, LI, LJ, LK, MA, MB, MC, MD, ME, MF, MG, MH, MI, MJ, MK, NA, NB, NC, ND, NE, NF, NG, NH, NI, NJ, NK, OA, OB, OC, OD, OE, OF, OG, OH, OI, OJ, OK, PA, PB, PC, PD, PE, PF, PG, PH, PI, PJ, PK, QA, QB, QC, QD, QE, QF, QG, QH, QI, QJ, QK, RA, RB, RC, RD, RE, RF, RG, RH, RI, RJ, RK, SA, SB, SC, SD, SE, SF, SG, SH, SI, SJ, SK, TA, TB, TC, TD, TE, TF, TG, TH, TI, TJ, TK, UA, UB, UC, UD, UE, UF, UG, UH, UI, UJ, UK, VA, VB, VC, VD, VE, VF, VG, VH, VI, VJ, VK, WA, WB, WC, WD, WE, WF, WG, WH, WI, WJ, WK, XA, XB, XC, XD, XE, XF, XG, XH, XI, XJ, XK | AU | 20 (best 0.60) |
| 6RVW | Structure of right-handed protein cage consisting of 24 eleven-membered ring proteins held together… | electron microscopy | AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, HA, HB, HC, HD, HE, HF, HG, HH, HI, HJ, HK, IA, IB, IC, ID, IE, IF, IG, IH, II, IJ, IK, JA, JB, JC, JD, JE, JF, JG, JH, JI, JJ, JK, KA, KB, KC, KD, KE, KF, KG, KH, KI, KJ, KK, LA, LB, LC, LD, LE, LF, LG, LH, LI, LJ, LK, MA, MB, MC, MD, ME, MF, MG, MH, MI, MJ, MK, NA, NB, NC, ND, NE, NF, NG, NH, NI, NJ, NK, OA, OB, OC, OD, OE, OF, OG, OH, OI, OJ, OK, PA, PB, PC, PD, PE, PF, PG, PH, PI, PJ, PK, QA, QB, QC, QD, QE, QF, QG, QH, QI, QJ, QK, RA, RB, RC, RD, RE, RF, RG, RH, RI, RJ, RK, SA, SB, SC, SD, SE, SF, SG, SH, SI, SJ, SK, TA, TB, TC, TD, TE, TF, TG, TH, TI, TJ, TK, UA, UB, UC, UD, UE, UF, UG, UH, UI, UJ, UK, VA, VB, VC, VD, VE, VF, VG, VH, VI, VJ, VK, WA, WB, WC, WD, WE, WF, WG, WH, WI, WJ, WK, XA, XB, XC, XD, XE, XF, XG, XH, XI, XJ, XK | AU | 20 (best 0.59) |
| 8R59 | Structure of the Co(II) triggered TRAP (S33HK35H) protein cage (levo form) | electron microscopy | A, L, M, N, O, P, Q, R, S, T, U, V, W, Y, Z, a, b, c, d, e, f, g, h, i, B, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z, 0, 1, 2, 3, 4, 5, C, 6, 7, 8, 9, AA, BA, CA, DA, EA, FA, GA, HA, IA, JA, KA, LA, MA, NA, OA, PA, QA, RA, SA, D, TA, UA, VA, WA, XA, YA, ZA, aA, bA, cA, dA, eA, fA, gA, hA, iA, jA, kA, lA, mA, nA, oA, pA, E, qA, rA, sA, tA, uA, vA, wA, xA, yA, zA, 0A, 1A, 2A, 3A, 4A, 5A, 6A, 7A, 8A, 9A, AB, BB, CB, F, DB, EB, FB, GB, HB, IB, JB, KB, LB, MB, NB, OB, PB, QB, RB, SB, TB, UB, VB, WB, XB, YB, ZB, G, aB, bB, cB, dB, eB, fB, gB, hB, iB, jB, kB, lB, mB, nB, oB, pB, qB, rB, sB, tB, uB, vB, wB, H, xB, yB, zB, 0B, 1B, 2B, 3B, 4B, 5B, 6B, 7B, 8B, 9B, AC, BC, CC, DC, EC, FC, GC, HC, IC, JC, I, KC, LC, MC, NC, OC, PC, QC, RC, SC, TC, UC, VC, WC, XC, YC, ZC, aC, bC, cC, dC, eC, fC, gC, J, hC, iC, jC, kC, lC, mC, nC, oC, pC, qC, rC, sC, tC, uC, vC, wC, xC, yC, zC, 0C, 1C, 2C, 3C, K, 4C, 5C, 6C, 7C, 8C, 9C, AD, BD, CD, DD, ED, FD, GD, HD, ID, JD, KD, LD, MD, ND, OD, PD, QD | CO | 20 (best 0.80) |
| 8R5A | Structure of the Co(II) triggered TRAP (S33HK35H) protein cage (dextro form) | electron microscopy | A, L, M, N, O, P, Q, R, S, T, U, V, W, Y, Z, a, b, c, d, e, f, g, h, i, B, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z, 0, 1, 2, 3, 4, 5, C, 6, 7, 8, 9, AA, BA, CA, DA, EA, FA, GA, HA, IA, JA, KA, LA, MA, NA, OA, PA, QA, RA, SA, D, TA, UA, VA, WA, XA, YA, ZA, aA, bA, cA, dA, eA, fA, gA, hA, iA, jA, kA, lA, mA, nA, oA, pA, E, qA, rA, sA, tA, uA, vA, wA, xA, yA, zA, 0A, 1A, 2A, 3A, 4A, 5A, 6A, 7A, 8A, 9A, AB, BB, CB, F, DB, EB, FB, GB, HB, IB, JB, KB, LB, MB, NB, OB, PB, QB, RB, SB, TB, UB, VB, WB, XB, YB, ZB, G, aB, bB, cB, dB, eB, fB, gB, hB, iB, jB, kB, lB, mB, nB, oB, pB, qB, rB, sB, tB, uB, vB, wB, H, xB, yB, zB, 0B, 1B, 2B, 3B, 4B, 5B, 6B, 7B, 8B, 9B, AC, BC, CC, DC, EC, FC, GC, HC, IC, JC, I, KC, LC, MC, NC, OC, PC, QC, RC, SC, TC, UC, VC, WC, XC, YC, ZC, aC, bC, cC, dC, eC, fC, gC, J, hC, iC, jC, kC, lC, mC, nC, oC, pC, qC, rC, sC, tC, uC, vC, wC, xC, yC, zC, 0C, 1C, 2C, 3C, K, 4C, 5C, 6C, 7C, 8C, 9C, AD, BD, CD, DD, ED, FD, GD, HD, ID, JD, KD, LD, MD, ND, OD, PD, QD | CO | 20 (best 0.81) |
| Q9X6J6 | AlphaFold monomer V2.0 prediction for transcription attenuation protein mtrb (Q9X6J6) | predicted | A | — | — |
Ligands
Experiment against prediction
- 2EXS chain A against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.28 Å
- 2EXT chain A against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.28 Å
- 3ZZS chain C against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.36 Å
- 1QAW chain K against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.34 Å
- 1C9S chain J against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.34 Å
- 1QAW chain G against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.34 Å
- 1GTF chain E against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.35 Å
- 1GTF chain H against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.35 Å
- 1QAW chain C against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.36 Å
- 5EEY chain J against the predicted model Q9X6J6: TM-score 0.99, RMSD 0.35 Å
Elsewhere
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