UniProt Q9WYU4
Pyridoxal biosynthesis lyase pdxS (Q9WYU4)
Pyridoxal biosynthesis lyase pdxS (UniProt Q9WYU4), EC 4.-.-.-: 2 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 29 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- Q9WYU4
- Protein
- Pyridoxal biosynthesis lyase pdxS
- EC
- 4.-.-.-
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 29 · 3 records with a druggable one
Structures
3 records of Q9WYU4 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2ISS | Structure of the PLP synthase Holoenzyme from Thermotoga maritima | x-ray diffraction | A, B, C | 5RP, PO4 | 14 (best 0.71) |
| 2ISS | Structure of the plp synthase holoenzyme from thermotoga maritima | x-ray diffraction | A, B, C | 5RP, PO4 | 14 (best 0.71) |
| Q9WYU4 | AlphaFold monomer V2.0 prediction for pyridoxal 5'-phosphate synthase subunit pdxs (Q9WYU4) | predicted | A | — | 1 (best 0.73) |
Ligands
Experiment against prediction
- 2ISS chain C against the predicted model Q9WYU4: TM-score 0.99, RMSD 0.55 Å
- 2ISS chain C against the predicted model Q9WYU4: TM-score 0.99, RMSD 0.55 Å
- 2ISS chain A against the predicted model Q9WYU4: TM-score 0.99, RMSD 0.56 Å
- 2ISS chain A against the predicted model Q9WYU4: TM-score 0.99, RMSD 0.56 Å
- 2ISS chain B against the predicted model Q9WYU4: TM-score 0.98, RMSD 0.57 Å
- 2ISS chain B against the predicted model Q9WYU4: TM-score 0.98, RMSD 0.57 Å
Elsewhere
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