UniProt Q9V1V5
30S ribosomal protein S5 (Q9V1V5)
30S ribosomal protein S5 (UniProt Q9V1V5): 16 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9V1V5
- Protein
- 30S ribosomal protein S5
- Experimental structures
- 16
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 17 · 7 records with a druggable one
Structures
17 records of Q9V1V5 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5JB3 | Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE… | electron microscopy | F | — | 3 (best 0.85) |
| 5JB3 | Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-remote… | electron microscopy | F | — | — |
| 6SW9 | IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid… | electron microscopy | F | ZN | 2 (best 0.82) |
| 6SW9 | IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid… | electron microscopy | F | ZN | — |
| 6SWC | IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid… | electron microscopy | F | ZN | 4 (best 0.85) |
| 6SWC | IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid… | electron microscopy | F | ZN | — |
| 6SWD | IC2 body model of cryo-EM structure of a full archaeal ribosomal translation initiation complex… | electron microscopy | F | ZN | 2 (best 0.80) |
| 6SWD | IC2 body model of cryo-EM structure of a full archaeal ribosomal translation initiation complex… | electron microscopy | F | ZN | — |
| 7ZAG | Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the… | electron microscopy | F | ZN, MG | — |
| 7ZAG | Cryo-EM structure of a pyrococcus abyssi 30S bound to met-initiator TRNA,MRNA, AIF1A and the… | electron microscopy | F | ZN, MG | — |
| 7ZAH | Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B | electron microscopy | F | ZN, MG | 2 (best 0.83) |
| 7ZAH | Cryo-EM structure of an archaeal AIF5B bound to the ssu translation initiation complex | electron microscopy | F | ZN, MG | — |
| 7ZAI | Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A. | electron microscopy | F | ZN, MG | 2 (best 0.86) |
| 7ZAI | Cryo-EM structure of a pyrococcus abyssi 30S bound to met-initiator tRNA, mRNA and AIF1A. | electron microscopy | F | ZN, MG | — |
| 7ZHG | High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and… | electron microscopy | F | MG, ZN | 2 (best 0.85) |
| 7ZHG | High-resolution cryo-EM structure of pyrococcus abyssi 30S ribosomal subunit bound to mRNA and… | electron microscopy | F | MG, ZN | — |
| Q9V1V5 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S5 (Q9V1V5) | predicted | A | — | — |
Ligands
Experiment against prediction
- 7ZAG chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.83 Å
- 7ZAG chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.83 Å
- 7ZHG chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.83 Å
- 7ZHG chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.83 Å
- 7ZAI chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.84 Å
- 7ZAI chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.84 Å
- 7ZAH chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.84 Å
- 7ZAH chain F against the predicted model Q9V1V5: TM-score 0.98, RMSD 0.84 Å
- 6SWD chain F against the predicted model Q9V1V5: TM-score 0.97, RMSD 0.95 Å
- 6SWD chain F against the predicted model Q9V1V5: TM-score 0.97, RMSD 0.95 Å
Elsewhere
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