UniProt Q9UQF0
Syncytin-1 (Q9UQF0)
Syncytin-1 (UniProt Q9UQF0): 6 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 18 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9UQF0
- Protein
- Syncytin-1
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 18 · 3 records with a druggable one
Structures
7 records of Q9UQF0 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5HA6 | Crystal structure of human syncytin-1 fusion subunit | x-ray diffraction | A, B | CL | — |
| 5HA6 | Crystal structure of human syncytin-1 fusion subunit | x-ray diffraction | A, B | — | — |
| 6RX1 | Crystal structure of human syncytin 1 in post-fusion conformation | x-ray diffraction | A | CL | — |
| 6RX1 | Crystal structure of human syncytin 1 in post-fusion conformation | x-ray diffraction | A | CL | — |
| 8OUH | Complex of human ASCT2 with Syncytin-1 | electron microscopy | D | — | 7 (best 0.86) |
| 8OUJ | Heterotrimeric Complex of Human ASCT2 with Syncytin-1 | electron microscopy | D | — | 5 (best 0.86) |
| Q9UQF0 | AlphaFold monomer V2.0 prediction for syncytin-1 (Q9UQF0) | predicted | A | — | 6 (best 0.77) |
Ligands
- CL · Chloride ion · in 3 records
Experiment against prediction
- 8OUJ chain D against the predicted model Q9UQF0: TM-score 0.82, RMSD 1.94 Å
- 8OUH chain D against the predicted model Q9UQF0: TM-score 0.82, RMSD 2.12 Å
- 5HA6 chain B against the predicted model Q9UQF0: TM-score 0.46, RMSD 2.23 Å
- 5HA6 chain B against the predicted model Q9UQF0: TM-score 0.46, RMSD 2.23 Å
- 6RX1 chain A against the predicted model Q9UQF0: TM-score 0.43, RMSD 2.46 Å
- 6RX1 chain A against the predicted model Q9UQF0: TM-score 0.43, RMSD 2.46 Å
- 5HA6 chain A against the predicted model Q9UQF0: TM-score 0.41, RMSD 2.47 Å
- 5HA6 chain A against the predicted model Q9UQF0: TM-score 0.41, RMSD 2.47 Å
Elsewhere
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