UniProt Q9NX02
NACHT, LRR and PYD domains-containing protein 2,Beta-2-microglobulin,MHC class I antigen (Q9NX02)
NACHT, LRR and PYD domains-containing protein 2,Beta-2-microglobulin,MHC class I antigen (UniProt Q9NX02): 3 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 25 pockets. Binding sites, druggability and…
- UniProt
- Q9NX02
- Protein
- NACHT, LRR and PYD domains-containing protein 2,Beta-2-microglobulin,MHC class…
- Experimental structures
- 3
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 25 · 4 records with a druggable one
Structures
4 records of Q9NX02 in the MolNFT archive: 3 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 9C6V | Crystal Structure of a single chain trimer composed of HLA-B*39:06 Y84C variant… | x-ray diffraction | A | CL | 3 (best 0.70) |
| 9C6W | Crystal Structure of a single chain trimer composed of HLA-B*39:06 Y84C variant… | x-ray diffraction | A, B | SO4, CL, P3G | 8 (best 0.72) |
| 9C6X | Crystal Structure of a single chain trimer composed of HLA-B*39:01 Y84C variant… | x-ray diffraction | A | P4G | 4 (best 0.70) |
| Q9NX02 | AlphaFold monomer V2.0 prediction for nacht, lrr and pyd domains- containing protein 2 (Q9NX02) | predicted | A | — | 10 (best 0.83) |
Ligands
Experiment against prediction
- 9C6V chain A against the predicted model P61769: TM-score 0.26, RMSD 1.54 Å
- 9C6X chain A against the predicted model P61769: TM-score 0.26, RMSD 1.45 Å
- 9C6W chain B against the predicted model P61769: TM-score 0.26, RMSD 1.58 Å
- 9C6W chain A against the predicted model P61769: TM-score 0.26, RMSD 1.64 Å
- 9C6W chain A against the predicted model Q9NX02: TM-score 0.31, RMSD 7.44 Å
- 9C6V chain A against the predicted model Q9NX02: TM-score 0.30, RMSD 7.46 Å
- 9C6W chain B against the predicted model Q9NX02: TM-score 0.30, RMSD 7.04 Å
- 9C6X chain A against the predicted model Q9NX02: TM-score 0.27, RMSD 7.19 Å
Elsewhere
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