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Ligand · P4G

P4G · 1-ethoxy-2-(2-ethoxyethoxy)ethane

P4G, 1-ethoxy-2-(2-ethoxyethoxy)ethane (C8 H18 O3, 162.2 g/mol), in the MolNFT structures on GenesisL1: bound in 30 records (25 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
P4G
Formula
C8 H18 O3
Class
ligand
Structures
30
PDB entries
25

Binding sites

P4G in 30 structures; the first of them:

  • 4XP1 · X-ray structure of Drosophila dopamine transporter bound to neurotransmitter dopamine · P4G A707 · binds TYR111, ALA573, VAL574, PHE577
  • 4XP4 · X-ray structure of Drosophila dopamine transporter in complex with cocaine · P4G A702 · binds THR315, PHE319, GLY480, TYR481, LEU484, ILE534, GLY538
  • 4XP9 · X-ray structure of Drosophila dopamine transporter bound to psychostimulant D-amphetamine · P4G C707 · binds ALA573, VAL574, PHE577
  • 5CMZ · Artificial HIV fusion inhibitor AP3 fused to the C-terminus of gp41 NHR · P4G A203 · binds TYR41
  • 6EQ8 · Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with… · P4G D713 · binds SER279, ARG281, LEU661, PHE662
  • 6EUN · Crystal structure of Neisseria meningitidis vaccine antigen NadA variant 3 · P4G A208 · binds LEU146, ASN149, PHE153, THR151
  • 6HLZ · Structure in C2 form of the PBP AgtB from A.tumefacien R10 in complex with agropinic acid · P4G A429
  • 6M0F · X-ray structure of Drosophila dopamine transporter with subsiteB mutations (D121G/S426M)… · P4G A604 · binds THR315, PHE319, GLU384, ASP475, ARG476, GLY480, TYR481, LEU484 and 2 more
  • 7P9E · Chlamydomonas reinhardtii NADPH Dependent Thioredoxin Reductase 1 domain CS mutant · P4G A502 · binds PHE33
  • 8OFV · Human adenovirus type 53 fiber-knob protein complexed with sialic acid · P4G B409 · binds TYR313, PRO318, TYR309, ASN311, TYR313, PRO318, PRO321, THR323 and 2 more
  • 8Q7S · Crystal structure of the SARS-CoV-2 RBD (Wuhan) with neutralizing VHHs Ma6F06 and Re21H01 · P4G A601 · binds ILE358, SER359, ASN360, CYS361, VAL362, ALA363, TYR365, LEU387 and 7 more
  • 5LXM · Crystal structure of aurora-a bound to a hydrocarbon-stapled proteomimetic of TPX2 · P4G A507 · binds TRP277, LEU289, GLY291, TYR334, TYR338
  • 5OEX · Complex with iodine ion for thiocyanate dehydrogenase from thioalkalivibrio paradoxus · P4G A605 · binds ASP214, ARG237
  • 5YQW · Structure and function of a novel periplasmic chitooligosaccharide- binding protein from… · P4G A601 · binds ASP342, GLY343, PHE344, ALA378
  • 6CPE · Structure of apo, dephosphorylated aurora a (122-403) in an active conformation · P4G A501 · binds LEU225, SER226, LYS227, PHE228, PHE351
  • 6EQ8 · Structure of the periplasmic binding protein (pbp) melb (ATU4661) in complex with… · P4G D713 · binds SER279, ARG281, LEU661, PHE662

Residues it binds most

TYR 31, ALA 23, PHE 24, ASN 19, LEU 22, ILE 21, GLU 11, SER 14, ASP 15, GLN 9 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • CL · Chloride ion
  • PEG · Di(hydroxyethyl)ether
  • SO4 · Sulfate ion
  • NA · Sodium ion
  • GOL · Glycerol
  • CLR · Cholesterol
  • CA · Calcium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • PG4 · Tetraethylene glycol
  • Y01 · Cholesterol hemisuccinate
  • GLC · alpha-D-glucopyranose

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