UniProt Q9NQ50
39S ribosomal protein L40, mitochondrial (Q9NQ50)
39S ribosomal protein L40, mitochondrial (UniProt Q9NQ50): 32 experimental structures and 1 predicted model on GenesisL1, 9 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9NQ50
- Protein
- 39S ribosomal protein L40, mitochondrial
- Experimental structures
- 32
- Predicted models
- 1
- Pockets
- 9 · 9 records with a druggable one
Structures
33 records of Q9NQ50 in the MolNFT archive: 32 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3J7Y | Structure of the large ribosomal subunit from human mitochondria | electron microscopy | 8 | — | — |
| 3J7Y | Structure of the large ribosomal subunit from human mitochondria | electron microscopy | 8 | — | — |
| 3J9M | Structure of the human mitochondrial ribosome (class 1) | electron microscopy | 8 | — | — |
| 5OOL | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | 8 | — | — |
| 5OOL | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | 8 | — | — |
| 5OOM | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | 8 | — | — |
| 5OOM | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded… | electron microscopy | 8 | — | — |
| 6I9R | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | electron microscopy | 8 | — | — |
| 6NU2 | Structural insights into unique features of the human mitochondrial ribosome recycling | electron microscopy | 8 | — | — |
| 6VLZ | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | electron microscopy | 8 | — | 1 (best 0.87) |
| 6ZS9 | Human mitochondrial ribosome in complex with ribosome recycling factor | electron microscopy | 8 | — | — |
| 6ZSB | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | electron microscopy | 8 | — | — |
| 6ZSC | Human mitochondrial ribosome in complex with E-site tRNA | electron microscopy | 8 | — | 1 (best 0.86) |
| 7L20 | Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt. | electron microscopy | 8 | — | — |
| 7ODT | State C of the human mitoribosomal large subunit assembly intermediate | electron microscopy | 8 | — | 1 (best 0.86) |
| 7OF0 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | 8 | — | — |
| 7OF0 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | 8 | — | — |
| 7OF4 | Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC… | electron microscopy | 8 | — | — |
| 7OF5 | Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with… | electron microscopy | 8 | — | — |
| 7OI7 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2 | electron microscopy | 8 | — | — |
| 7OI8 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A | electron microscopy | 8 | — | — |
| 7OI9 | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B | electron microscopy | 8 | — | — |
| 7OIA | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C | electron microscopy | 8 | — | — |
| 7OIB | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D | electron microscopy | 8 | — | — |
| 7OIC | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4 | electron microscopy | 8 | — | 1 (best 0.86) |
| 7OIE | Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B | electron microscopy | 8 | — | — |
| 7PD3 | Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and… | electron microscopy | 8 | — | — |
| 7QI6 | Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution | electron microscopy | 8 | — | 1 (best 0.86) |
| 8K2A | Cryo-EM structure of the human 55S mitoribosome with Tigecycline | electron microscopy | Ln | — | 1 (best 0.86) |
| 8OIR | 55S human mitochondrial ribosome with mtRF1 and P-site tRNA | electron microscopy | Bp | — | 1 (best 0.85) |
| 8OIT | 39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA | electron microscopy | Bp | — | 1 (best 0.86) |
| 8PK0 | human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7 | electron microscopy | 8 | — | 1 (best 0.86) |
| Q9NQ50 | AlphaFold monomer V2.0 prediction for 39S ribosomal protein L40, mitochondrial (Q9NQ50) | predicted | A | — | — |
Experiment against prediction
- 3J7Y chain 8 against the predicted model Q9NQ50: TM-score 0.95, RMSD 0.59 Å
- 3J7Y chain 8 against the predicted model Q9NQ50: TM-score 0.95, RMSD 0.59 Å
- 7OF4 chain 8 against the predicted model Q9NQ50: TM-score 0.78, RMSD 1.37 Å
- 7OF0 chain 8 against the predicted model Q9NQ50: TM-score 0.78, RMSD 1.38 Å
- 7OF0 chain 8 against the predicted model Q9NQ50: TM-score 0.78, RMSD 1.38 Å
- 7OF5 chain 8 against the predicted model Q9NQ50: TM-score 0.77, RMSD 1.40 Å
- 6NU2 chain 8 against the predicted model Q9NQ50: TM-score 0.71, RMSD 2.59 Å
- 3J9M chain 8 against the predicted model Q9NQ50: TM-score 0.69, RMSD 2.51 Å
- 5OOM chain 8 against the predicted model Q9NQ50: TM-score 0.69, RMSD 2.43 Å
- 5OOM chain 8 against the predicted model Q9NQ50: TM-score 0.69, RMSD 2.43 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.