UniProt Q945M1

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q945M1)

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (UniProt Q945M1): 8 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 16 pockets. Binding sites, druggability and experiment against…

UniProt: Q945M1
Protein: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
Experimental structures: 8
Predicted models: 1
Ligands: 2
Pockets: 16 · 5 records with a druggable one

Structures

9 records of Q945M1 in the MolNFT archive: 8 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
7AQW	Cryo-EM structure of arabidopsis thaliana complex-I (membrane tip)	electron microscopy	n	8Q1	—
7AR7	Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation)	electron microscopy	n	8Q1	3 (best 0.81)
7AR7	Cryo-EM structure of arabidopsis thaliana complex-I (open conformation)	electron microscopy	n	8Q1	—
7AR8	Cryo-EM structure of arabidopsis thaliana complex-I (closed conformation)	electron microscopy	n	8Q1	—
7ARB	Cryo-EM structure of arabidopsis thaliana complex-I (complete composition)	electron microscopy	n	8Q1	—
8BEH	Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI membrane tip)	electron microscopy	n	PC7, 8Q1	9 (best 0.82)
8BQ5	Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 1…	electron microscopy	n	8Q1	2 (best 0.81)
8BQ6	Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 2…	electron microscopy	n	8Q1	1 (best 0.81)
Q945M1	AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9…	predicted	A	—	1 (best 0.66)

Ligands

8Q1 · S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy) butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate · in 8 records
PC7 · (7S)-4-hydroxy-N,N,N-trimethyl-9-oxo-7-[(palmitoyloxy) methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide · in 1 record

Experiment against prediction

7AQW chain n against the predicted model Q945M1: TM-score 0.87, RMSD 1.78 Å
7ARB chain n against the predicted model Q945M1: TM-score 0.87, RMSD 1.79 Å
8BEH chain n against the predicted model Q945M1: TM-score 0.86, RMSD 1.30 Å
8BQ5 chain n against the predicted model Q945M1: TM-score 0.86, RMSD 1.30 Å
7AR8 chain n against the predicted model Q945M1: TM-score 0.86, RMSD 2.12 Å
8BQ6 chain n against the predicted model Q945M1: TM-score 0.86, RMSD 1.36 Å
7AR7 chain n against the predicted model Q945M1: TM-score 0.85, RMSD 1.74 Å
7AR7 chain n against the predicted model Q945M1: TM-score 0.85, RMSD 1.74 Å

Elsewhere

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