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Ligand · PC7

PC7 · (7S)-4-hydroxy-N,N,N-trimethyl-9-oxo-7-[(palmitoyloxy) methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide

PC7, (7S)-4-hydroxy-N,N,N-trimethyl-9-oxo-7-[(palmitoyloxy) methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (C42 H85 N O8 P +1, 763.1 g/mol), in the MolNFT structures on GenesisL1: bound in 19 records (14 PDB entries). Every…

Component
PC7
Formula
C42 H85 N O8 P +1
Class
ligand
Structures
19
PDB entries
14

Binding sites

PC7 in 19 structures; the first of them:

  • 7AQQ · Cryo-EM structure of Arabidopsis thaliana Complex-I (membrane core) · PC7 v201 · binds ILE31, ILE34, HIS35, PHE39, TYR45, VAL45, GLY59, PRO60 and 8 more
  • 7AR7 · Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation) · PC7 M501 · binds LEU10, SER13, SER14, GLY17, PHE18, HIS109, ARG112, CYS115 and 23 more
  • 7AR9 · Cryo-EM structure of Polytomella Complex-I (membrane arm) · PC7 A201 · binds ALA135, VAL138, GLY139, PHE141, PHE142, TRP145, ARG146, PRO279 and 10 more
  • 7ARD · Cryo-EM structure of Polytomella Complex-I (complete composition) · PC7 A201 · binds ALA135, VAL138, GLY139, PHE141, PHE142, TRP145, ARG146, PRO279 and 8 more
  • 7LCG · The mature Usutu SAAR-1776, Model A · PC7 A602 · binds ALA414, LEU417, ALA418, ALA419, GLY421, HIS442, PHE445, GLY446 and 5 more
  • 8BEF · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI membrane core) · PC7 d101 · binds LEU27, PHE28, ASN31, LYS117, GLU118, ILE121, ALA122, ILE125 and 21 more
  • 8BEH · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI membrane tip) · PC7 L704 · binds PHE295, ILE302, LEU303, VAL425, LEU428, PHE429, TYR432, VAL531 and 14 more
  • 8BEL · Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CIII membrane domain) · PC7 C410 · binds TRP35, LEU101, PHE104, TYR108, TYR109, SER323, PHE332, TRP333 and 5 more
  • 8VC1 · CryoEM structure of insect gustatory receptor BmGr9 · PC7 A503 · binds TYR59, THR63, VAL66, ILE70, ALA104, VAL105, GLY108, VAL109 and 3 more

Residues it binds most

LEU 71, PHE 56, TYR 56, ILE 63, VAL 75, GLY 52, SER 32, ALA 38, THR 36, ARG 30 (residue and the binding sites it lines).

Found with

  • PTY · Phosphatidylethanolamine
  • 8Q1 · S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy) butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate
  • PGT · (1S)-2-{[{[(2R)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate
  • ZN · Zinc ion
  • FES · Fe2/s2 (inorganic) cluster
  • UQ9 · Ubiquinone-9
  • CDL · Cardiolipin
  • FMN · Flavin mononucleotide
  • LMN · Lauryl Maltose Neopentyl Glycol
  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate
  • SF4 · Iron/sulfur cluster
  • T7X · Phosphatidylinositol

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