UniProt Q8ZM86
tRNA(fMet)-specific endonuclease VapC (Q8ZM86)
tRNA(fMet)-specific endonuclease VapC (UniProt Q8ZM86), EC 3.1.-.-: 4 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 17 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q8ZM86
- Protein
- tRNA(fMet)-specific endonuclease VapC
- EC
- 3.1.-.-
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 17 · 2 records with a druggable one
Structures
5 records of Q8ZM86 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6IFC | Crystal structure of VapBC from Salmonella typhimurium | x-ray diffraction | A, C, E, G | CA | — |
| 6IFC | Crystal structure of vapbc from salmonella typhimurium | x-ray diffraction | A, C, E, G | CA | — |
| 6IFM | Crystal structure of DNA bound VapBC from Salmonella typhimurium | x-ray diffraction | A, E, C, G | — | 8 (best 0.71) |
| 6IFM | Crystal structure of DNA bound vapbc from salmonella typhimurium | x-ray diffraction | A, E, C, G | — | 8 (best 0.71) |
| Q8ZM86 | AlphaFold monomer V2.0 prediction for TRNA(FMET)-specific endonuclease vapc (Q8ZM86) | predicted | A | — | 1 (best 0.34) |
Ligands
- CA · Calcium ion · in 2 records
Experiment against prediction
- 6IFC chain A against the predicted model Q8ZM86: TM-score 0.96, RMSD 0.95 Å
- 6IFC chain A against the predicted model Q8ZM86: TM-score 0.96, RMSD 0.95 Å
- 6IFM chain A against the predicted model Q8ZM86: TM-score 0.96, RMSD 1.00 Å
- 6IFM chain A against the predicted model Q8ZM86: TM-score 0.96, RMSD 1.00 Å
Elsewhere
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